Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_11940 | Not Available | Positive | 2956619 - 2957104 | 18559.4 |
| hypothetical protein | DUE52_11945 | Not Available | Positive | 2957140 - 2957733 | 22273.5 |
| molecular chaperone htpg | DUE52_11950 | Not Available | Negative | 2957835 - 2959664 | 69425.6 |
| rhodanese-like domain-containing protein | DUE52_11955 | Not Available | Positive | 2959947 - 2960216 | 10303.4 |
| diaminopimelate epimerase | DUE52_11960 | Not Available | Negative | 2960220 - 2960990 | 27874.8 |
| 50s ribosomal protein l19 | DUE52_11965 | Not Available | Negative | 2961158 - 2961535 | 14348.4 |
| nad(p)h-hydrate dehydratase | DUE52_11970 | Not Available | Positive | 2961721 - 2963220 | 54731.6 |
| ferrous iron transport protein b | DUE52_11975 | Not Available | Negative | 2963928 - 2966066 | 78602.4 |
| ferrous iron transport protein a | DUE52_11980 | Not Available | Negative | 2966126 - 2966353 | 8216.19 |
| abc transporter permease | DUE52_11985 | Not Available | Positive | 2966679 - 2967347 | 24726.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
