Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | DUE52_11890 | Not Available | Positive | 2945853 - 2947517 | 62250.2 |
| hypothetical protein | DUE52_11895 | Not Available | Positive | 2947555 - 2947977 | 15705.0 |
| sco family protein | DUE52_11900 | Not Available | Positive | 2948050 - 2948697 | 23973.8 |
| cytochrome c | DUE52_11905 | Not Available | Positive | 2948694 - 2949122 | 16503.7 |
| lps export abc transporter periplasmic protein lptc | DUE52_11910 | Not Available | Negative | 2949130 - 2949684 | 21160.5 |
| hypothetical protein | DUE52_11915 | Not Available | Negative | 2949784 - 2951001 | 44394.4 |
| type iii pantothenate kinase | DUE52_11920 | Not Available | Negative | 2951054 - 2951785 | 26687.2 |
| mechanosensitive ion channel family protein | DUE52_11925 | Not Available | Positive | 2951854 - 2952999 | 43510.4 |
| transcription termination factor rho | DUE52_11930 | Not Available | Positive | 2953391 - 2955439 | 76356.4 |
| flagellar motor protein motb | DUE52_11935 | Not Available | Positive | 2955655 - 2956587 | 33639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
