Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DUE52_11840 | Not Available | Negative | 2932378 - 2934081 | 62537.2 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_11845 | Not Available | Positive | 2934378 - 2935166 | 27732.7 |
| flagellar motor protein motb | DUE52_11850 | Not Available | Negative | 2935225 - 2937531 | 86859.9 |
| trna lysidine(34) synthetase tils | DUE52_11855 | Not Available | Negative | 2937672 - 2939042 | 52389.4 |
| hypothetical protein | DUE52_11860 | Not Available | Positive | 2939204 - 2941297 | 77348.8 |
| t9ss c-terminal target domain-containing protein | DUE52_11865 | Not Available | Positive | 2941486 - 2942127 | 23917.7 |
| outer membrane protein assembly factor bamd | DUE52_11870 | Not Available | Positive | 2942270 - 2943154 | 34211.4 |
| dna-directed rna polymerase subunit omega | DUE52_11875 | Not Available | Positive | 2943223 - 2943543 | 12034.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DUE52_11880 | Not Available | Positive | 2943664 - 2944884 | 44352.8 |
| duf4835 family protein | DUE52_11885 | Not Available | Positive | 2944881 - 2945801 | 35124.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
