Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_11790 | Not Available | Positive | 2921287 - 2923539 | 82881.4 |
| arac family transcriptional regulator | DUE52_11795 | Not Available | Negative | 2923553 - 2924455 | 35014.5 |
| antibiotic biosynthesis monooxygenase | DUE52_11800 | Not Available | Positive | 2924585 - 2925031 | 16806.8 |
| trna 2-thiouridine(34) synthase mnma | DUE52_11805 | Not Available | Positive | 2925224 - 2926405 | 43521.7 |
| hypothetical protein | DUE52_11810 | Not Available | Positive | 2926603 - 2927127 | 19517.6 |
| t9ss c-terminal target domain-containing protein | DUE52_11815 | Not Available | Positive | 2927186 - 2928808 | 58781.4 |
| fad-binding oxidoreductase | DUE52_11820 | Not Available | Negative | 2928823 - 2930025 | 44794.9 |
| hypothetical protein | DUE52_11825 | Not Available | Negative | 2930174 - 2930539 | 13380.9 |
| nudix domain-containing protein | DUE52_11830 | Not Available | Negative | 2930646 - 2931179 | 20193.0 |
| duf2911 domain-containing protein | DUE52_11835 | Not Available | Positive | 2931261 - 2932178 | 33008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
