Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_11735 | Not Available | Positive | 2907904 - 2908128 | 8520.77 |
| hypothetical protein | DUE52_11740 | Not Available | Negative | 2908177 - 2910159 | 75888.4 |
| duf2236 domain-containing protein | DUE52_11745 | Not Available | Negative | 2910178 - 2912154 | 74808.8 |
| sensor histidine kinase | DUE52_11750 | Not Available | Positive | 2912298 - 2913347 | 39287.0 |
| dna-binding response regulator | DUE52_11755 | Not Available | Positive | 2913344 - 2914054 | 27301.1 |
| hypothetical protein | DUE52_11760 | Not Available | Negative | 2914056 - 2917097 | 113871.0 |
| pqq-dependent sugar dehydrogenase | DUE52_11765 | Not Available | Negative | 2917299 - 2918519 | 43884.0 |
| nuclear transport factor 2 family protein | DUE52_11775 | Not Available | Positive | 2919032 - 2919514 | 18144.8 |
| aldo/keto reductase | DUE52_11780 | Not Available | Positive | 2919676 - 2920662 | 36216.6 |
| (2fe-2s)-binding protein | DUE52_11785 | Not Available | Positive | 2920795 - 2921250 | 16206.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
