Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_11635 | Not Available | Negative | 2886039 - 2886266 | 8891.91 |
| hypothetical protein | DUE52_11640 | Not Available | Positive | 2886274 - 2886525 | 9508.58 |
| hypothetical protein | DUE52_11645 | Not Available | Positive | 2886639 - 2886920 | 10702.6 |
| peroxiredoxin | DUE52_11650 | Not Available | Positive | 2887242 - 2887796 | 20952.8 |
| alkylhydroperoxidase | DUE52_11655 | Not Available | Positive | 2887907 - 2888497 | 21620.0 |
| cytochrome c | DUE52_11660 | Not Available | Positive | 2888660 - 2889661 | 35918.4 |
| uma2 family endonuclease | DUE52_11665 | Not Available | Negative | 2889761 - 2890387 | 23803.1 |
| ferrochelatase | DUE52_11670 | Not Available | Negative | 2890387 - 2891466 | 40657.1 |
| hydrogen peroxide-inducible genes activator | DUE52_11675 | Not Available | Positive | 2891671 - 2892606 | 35255.1 |
| atp-dependent helicase | DUE52_11680 | Not Available | Negative | 2892603 - 2893871 | 46247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
