Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_11585 | Not Available | Positive | 2866388 - 2869441 | 109247.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_11590 | Not Available | Positive | 2869541 - 2871016 | 54720.9 |
| hypothetical protein | DUE52_11595 | Not Available | Positive | 2871195 - 2872295 | 42109.7 |
| fad-dependent oxidoreductase | DUE52_11600 | Not Available | Positive | 2872382 - 2874184 | 66707.1 |
| hypothetical protein | DUE52_11605 | Not Available | Positive | 2874220 - 2876616 | 89327.7 |
| glycerophosphoryl diester phosphodiesterase | DUE52_11610 | Not Available | Positive | 2876698 - 2879205 | 92840.4 |
| hypothetical protein | DUE52_11615 | Not Available | Negative | 2879413 - 2879853 | 17102.1 |
| sodium transporter | DUE52_11620 | Not Available | Positive | 2879887 - 2881614 | 62302.5 |
| beta-galactosidase | DUE52_11625 | Not Available | Positive | 2881623 - 2883665 | 77071.5 |
| fad-dependent oxidoreductase | DUE52_11630 | Not Available | Positive | 2883640 - 2885937 | 85140.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
