Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DUE52_11535 | Not Available | Positive | 2847210 - 2847929 | 27022.3 |
| type vi secretion system tip protein vgrg | DUE52_11540 | Not Available | Positive | 2847939 - 2849696 | 63948.4 |
| hypothetical protein | DUE52_11545 | Not Available | Positive | 2849704 - 2850162 | 17194.3 |
| hypothetical protein | DUE52_11550 | Not Available | Positive | 2850175 - 2853132 | 109682.0 |
| hypothetical protein | DUE52_11555 | Not Available | Positive | 2853149 - 2855848 | 101157.0 |
| hypothetical protein | DUE52_11560 | Not Available | Positive | 2855853 - 2858852 | 112475.0 |
| hypothetical protein | DUE52_11565 | Not Available | Positive | 2858915 - 2860333 | 52864.8 |
| duf4157 domain-containing protein | DUE52_11570 | Not Available | Positive | 2860330 - 2863713 | 122971.0 |
| atp-binding protein | DUE52_11575 | Not Available | Positive | 2863703 - 2865019 | 49669.9 |
| laci family transcriptional regulator | DUE52_11580 | Not Available | Negative | 2864995 - 2866062 | 39260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
