Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | DUE52_01095 | Not Available | Positive | 292813 - 293808 | 36131.9 |
| n-acetyltransferase | DUE52_01100 | Not Available | Positive | 293813 - 294253 | 17096.3 |
| hypothetical protein | DUE52_01105 | Not Available | Negative | 294265 - 294498 | 9151.61 |
| uroporphyrinogen decarboxylase | DUE52_01110 | Not Available | Negative | 294495 - 295529 | 38145.3 |
| tetr/acrr family transcriptional regulator | DUE52_01115 | Not Available | Positive | 295716 - 296270 | 20978.4 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DUE52_01120 | Not Available | Positive | 296353 - 297594 | 44101.6 |
| fic family protein | DUE52_01125 | Not Available | Positive | 297874 - 299043 | 45480.7 |
| hypothetical protein | DUE52_01130 | Not Available | Positive | 299059 - 299616 | 21365.9 |
| prolipoprotein diacylglyceryl transferase | DUE52_01135 | Not Available | Negative | 299626 - 300486 | 32765.9 |
| hypothetical protein | DUE52_01140 | Not Available | Negative | 300500 - 300697 | 7609.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
