Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | DUE52_11030 | Not Available | Positive | 2737791 - 2739062 | 47290.0 |
| hypothetical protein | DUE52_11035 | Not Available | Negative | 2739067 - 2740236 | 44188.1 |
| duf2157 domain-containing protein | DUE52_11040 | Not Available | Negative | 2740277 - 2741227 | 35830.4 |
| vrr-nuc domain-containing protein | DUE52_11045 | Not Available | Positive | 2741287 - 2742978 | 66221.3 |
| class i sam-dependent methyltransferase | DUE52_11050 | Not Available | Negative | 2743050 - 2743787 | 28290.3 |
| cytochrome c | DUE52_11055 | Not Available | Positive | 2744004 - 2744384 | 13686.0 |
| uma2 family endonuclease | DUE52_11060 | Not Available | Negative | 2744528 - 2745151 | 23180.3 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DUE52_11065 | Not Available | Negative | 2745171 - 2745989 | 30117.2 |
| gwxtd domain-containing protein | DUE52_11070 | Not Available | Negative | 2745962 - 2747302 | 50547.4 |
| sam-dependent methyltransferase | DUE52_11075 | Not Available | Positive | 2747512 - 2748279 | 29515.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
