Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DUE52_01045 | Not Available | Negative | 280635 - 282497 | 69245.5 |
| ghkl domain-containing protein | DUE52_01050 | Not Available | Positive | 282618 - 284009 | 52374.5 |
| response regulator | DUE52_01055 | Not Available | Positive | 284013 - 285674 | 60752.1 |
| hypothetical protein | DUE52_01060 | Not Available | Positive | 285714 - 286001 | 10666.8 |
| glycosyl hydrolase family 43 | DUE52_01065 | Not Available | Negative | 286016 - 287041 | 38291.3 |
| d-2-hydroxyacid dehydrogenase | DUE52_01070 | Not Available | Negative | 287150 - 288079 | 33835.7 |
| t9ss c-terminal target domain-containing protein | DUE52_01075 | Not Available | Negative | 288128 - 290392 | 82703.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DUE52_01080 | Not Available | Positive | 290495 - 291778 | 46876.1 |
| hypothetical protein | DUE52_01085 | Not Available | Positive | 291801 - 292070 | 10535.6 |
| hypothetical protein | DUE52_01090 | Not Available | Positive | 292120 - 292776 | 24760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
