Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| faa hydrolase family protein | DUE52_10930 | Not Available | Negative | 2697568 - 2698422 | 30753.6 |
| uma2 family endonuclease | DUE52_10935 | Not Available | Positive | 2698562 - 2699176 | 24206.6 |
| alpha/beta hydrolase | DUE52_10940 | Not Available | Negative | 2699180 - 2701636 | 89771.9 |
| alpha-l-fucosidase | DUE52_10945 | Not Available | Negative | 2701655 - 2703094 | 54733.2 |
| beta-hexosaminidase | DUE52_10950 | Not Available | Negative | 2703148 - 2705457 | 86366.6 |
| phosphatase pap2 family protein | DUE52_10955 | Not Available | Negative | 2705492 - 2706808 | 49346.3 |
| rna-binding protein | DUE52_10960 | Not Available | Negative | 2706811 - 2710140 | 124228.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_10965 | Not Available | Negative | 2710217 - 2711800 | 58115.2 |
| susc/raga family tonb-linked outer membrane protein | DUE52_10970 | Not Available | Negative | 2711829 - 2714918 | 111074.0 |
| phosphatase pap2 family protein | DUE52_10975 | Not Available | Negative | 2715388 - 2716704 | 49620.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
