Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein | DUE52_10880 | Not Available | Negative | 2689728 - 2691092 | 51189.6 |
| zeta toxin family protein | DUE52_10885 | Not Available | Negative | 2691239 - 2691643 | 15237.4 |
| transcriptional regulator | DUE52_10890 | Not Available | Negative | 2691669 - 2691869 | 7435.91 |
| hypothetical protein | DUE52_10895 | Not Available | Negative | 2691866 - 2692375 | 19421.3 |
| (fe-s)-binding protein | DUE52_10900 | Not Available | Negative | 2692457 - 2693194 | 27423.2 |
| hypothetical protein | DUE52_10905 | Not Available | Negative | 2693273 - 2694046 | 29278.3 |
| l-rhamnose mutarotase | DUE52_10910 | Not Available | Negative | 2694123 - 2694449 | 12748.4 |
| l-fucose:h+ symporter permease | DUE52_10915 | Not Available | Negative | 2694512 - 2695801 | 46934.9 |
| short chain dehydrogenase | DUE52_10920 | Not Available | Negative | 2695888 - 2696670 | 28073.5 |
| amidohydrolase | DUE52_10925 | Not Available | Negative | 2696738 - 2697562 | 32089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
