Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_10830 | Not Available | Positive | 2675134 - 2675997 | 33549.4 |
| s9 family peptidase | DUE52_10835 | Not Available | Positive | 2676003 - 2678186 | 82249.8 |
| m1 family peptidase | DUE52_10840 | Not Available | Positive | 2678223 - 2679959 | 66422.7 |
| transposase | DUE52_10845 | Not Available | Negative | 2679901 - 2679994 | 3668.5 |
| duf11 domain-containing protein | DUE52_10850 | Not Available | Negative | 2679995 - 2682830 | 95035.9 |
| hypothetical protein | DUE52_10855 | Not Available | Negative | 2683418 - 2686630 | 120800.0 |
| fad-binding oxidoreductase | DUE52_10860 | Not Available | Negative | 2686699 - 2687775 | 40445.2 |
| (d)cmp kinase | DUE52_10865 | Not Available | Negative | 2687772 - 2688488 | 26866.5 |
| n-acetyltransferase | DUE52_10870 | Not Available | Negative | 2688519 - 2689082 | 21639.9 |
| hypothetical protein | DUE52_10875 | Not Available | Negative | 2689141 - 2689731 | 21586.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
