Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DUE52_10780 | Not Available | Negative | 2664568 - 2665521 | 36198.4 |
| sugar transferase | DUE52_10785 | Not Available | Negative | 2665500 - 2666675 | 43825.4 |
| dna-binding response regulator | DUE52_10790 | Not Available | Negative | 2666698 - 2667120 | 15699.0 |
| hpt domain-containing protein | DUE52_10795 | Not Available | Negative | 2667563 - 2667937 | 14481.6 |
| response regulator | DUE52_10800 | Not Available | Negative | 2667988 - 2669511 | 57553.7 |
| histidine kinase | DUE52_10805 | Not Available | Negative | 2669516 - 2670655 | 41686.5 |
| hypothetical protein | DUE52_10810 | Not Available | Negative | 2671082 - 2671402 | 12711.3 |
| fad-dependent oxidoreductase | DUE52_10815 | Not Available | Negative | 2671626 - 2672873 | 45243.9 |
| 4-hydroxyproline epimerase | DUE52_10820 | Not Available | Negative | 2672870 - 2673871 | 36602.8 |
| dihydrodipicolinate synthase family protein | DUE52_10825 | Not Available | Negative | 2673896 - 2674807 | 33149.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
