Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | DUE52_10730 | Not Available | Positive | 2649080 - 2651308 | 83799.9 |
| colanic acid exporter | DUE52_10735 | Not Available | Positive | 2651326 - 2652762 | 53529.0 |
| acyltransferase | DUE52_10740 | Not Available | Positive | 2652782 - 2653906 | 43336.1 |
| pkd domain-containing protein | DUE52_10745 | Not Available | Positive | 2653948 - 2654784 | 29956.0 |
| glycosyltransferase family 2 protein | DUE52_10750 | Not Available | Positive | 2654809 - 2655714 | 33127.2 |
| hypothetical protein | DUE52_10755 | Not Available | Positive | 2655730 - 2657037 | 47894.2 |
| glycosyltransferase | DUE52_10760 | Not Available | Positive | 2657089 - 2657874 | 30701.6 |
| glycosyltransferase | DUE52_10765 | Not Available | Positive | 2657923 - 2658699 | 30690.3 |
| t9ss c-terminal target domain-containing protein | DUE52_10770 | Not Available | Negative | 2658892 - 2662713 | 139296.0 |
| glycosyltransferase family 2 protein | DUE52_10775 | Not Available | Negative | 2663347 - 2664558 | 45453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
