Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DUE52_10680 | Not Available | Negative | 2637669 - 2638856 | 44640.9 |
| response regulator | DUE52_10685 | Not Available | Negative | 2639131 - 2639580 | 16520.4 |
| acyltransferase | DUE52_10690 | Not Available | Positive | 2640117 - 2641295 | 44899.4 |
| o-antigen ligase domain-containing protein | DUE52_10695 | Not Available | Positive | 2641337 - 2642770 | 53779.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | DUE52_10700 | Not Available | Positive | 2642832 - 2643404 | 21185.9 |
| gmc family oxidoreductase | DUE52_10705 | Not Available | Positive | 2643418 - 2645133 | 64529.2 |
| glycosyl transferase | DUE52_10710 | Not Available | Positive | 2645152 - 2646000 | 32722.5 |
| acyltransferase | DUE52_10715 | Not Available | Negative | 2646006 - 2646626 | 22683.7 |
| glycosyltransferase family 1 protein | DUE52_10720 | Not Available | Negative | 2646645 - 2647868 | 45784.7 |
| hypothetical protein | DUE52_10725 | Not Available | Positive | 2648250 - 2649065 | 30061.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
