Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DUE52_10630 | Not Available | Negative | 2623373 - 2624008 | 24319.6 |
| duf2892 domain-containing protein | DUE52_10635 | Not Available | Negative | 2624058 - 2624324 | 9662.33 |
| class a beta-lactamase-related serine hydrolase | DUE52_10640 | Not Available | Negative | 2624366 - 2625463 | 40746.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_10645 | Not Available | Negative | 2625639 - 2627162 | 55409.7 |
| susc/raga family tonb-linked outer membrane protein | DUE52_10650 | Not Available | Negative | 2627196 - 2630264 | 110722.0 |
| glycosidase | DUE52_10655 | Not Available | Negative | 2630442 - 2631662 | 45839.2 |
| sodium:solute symporter | DUE52_10660 | Not Available | Negative | 2632009 - 2633886 | 68773.5 |
| arac family transcriptional regulator | DUE52_10665 | Not Available | Positive | 2634155 - 2635027 | 33707.3 |
| gluconate 2-dehydrogenase subunit 3 family protein | DUE52_10670 | Not Available | Positive | 2635292 - 2635819 | 18530.2 |
| gmc family oxidoreductase | DUE52_10675 | Not Available | Positive | 2635833 - 2637545 | 63893.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
