Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_00995 | Not Available | Positive | 264577 - 264942 | 13843.8 |
| sigma-70 family rna polymerase sigma factor | DUE52_01000 | Not Available | Negative | 264978 - 265538 | 22074.5 |
| fecr family protein | DUE52_01005 | Not Available | Positive | 265751 - 266848 | 40955.9 |
| susc/raga family tonb-linked outer membrane protein | DUE52_01010 | Not Available | Positive | 266890 - 270468 | 129657.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_01015 | Not Available | Positive | 270494 - 271996 | 56285.6 |
| lyttr family transcriptional regulator | DUE52_01020 | Not Available | Positive | 272214 - 272960 | 28694.5 |
| hypothetical protein | DUE52_01025 | Not Available | Positive | 273108 - 273725 | 23242.3 |
| class a beta-lactamase-related serine hydrolase | DUE52_01030 | Not Available | Positive | 273703 - 274932 | 45765.8 |
| dna polymerase iv | DUE52_01035 | Not Available | Positive | 275051 - 276130 | 39864.0 |
| chat domain-containing protein | DUE52_01040 | Not Available | Positive | 276344 - 280573 | 157427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
