Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | DUE52_10480 | Not Available | Positive | 2592191 - 2593093 | 35869.6 |
| sugar phosphate isomerase/epimerase | DUE52_10485 | Not Available | Positive | 2593242 - 2594090 | 31587.0 |
| hypothetical protein | DUE52_10490 | Not Available | Negative | 2594151 - 2594537 | 13752.4 |
| peptidoglycan editing factor pgef | DUE52_10495 | Not Available | Positive | 2594857 - 2595621 | 27802.7 |
| glsb/yeaq/ymge family stress response membrane protein | DUE52_10500 | Not Available | Positive | 2595702 - 2595959 | 8791.15 |
| biotin--[acetyl-coa-carboxylase] ligase | DUE52_10505 | Not Available | Negative | 2596003 - 2596776 | 29078.7 |
| ribosome silencing factor | DUE52_10510 | Not Available | Positive | 2596881 - 2597264 | 14749.7 |
| atp-dependent zinc metalloprotease ftsh | DUE52_10515 | Not Available | Positive | 2597432 - 2599462 | 75119.0 |
| hypothetical protein | DUE52_10520 | Not Available | Negative | 2599561 - 2600337 | 28698.3 |
| udp-2,3-diacylglucosamine diphosphatase | DUE52_10525 | Not Available | Positive | 2600450 - 2601229 | 30583.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
