Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_10325 | Not Available | Negative | 2547718 - 2548485 | 27744.3 |
| duf4494 domain-containing protein | DUE52_10330 | Not Available | Positive | 2548756 - 2549238 | 18594.0 |
| rna-binding protein | DUE52_10335 | Not Available | Negative | 2549340 - 2552987 | 133739.0 |
| tonb-dependent receptor | DUE52_10340 | Not Available | Positive | 2553373 - 2556630 | 116897.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_10345 | Not Available | Positive | 2556661 - 2558400 | 63036.2 |
| hypothetical protein | DUE52_10350 | Not Available | Positive | 2558568 - 2559035 | 17049.7 |
| tonb-dependent receptor | DUE52_10355 | Not Available | Positive | 2559115 - 2561373 | 84677.2 |
| arac family transcriptional regulator | DUE52_10360 | Not Available | Positive | 2561377 - 2561955 | 22193.9 |
| heavy-metal-associated domain-containing protein | DUE52_10370 | Not Available | Positive | 2563527 - 2563880 | 13050.0 |
| kynureninase | DUE52_10375 | Not Available | Positive | 2564128 - 2565375 | 46460.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
