Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_10275 | Not Available | Positive | 2534420 - 2534719 | 11789.2 |
| glycine--trna ligase | DUE52_10280 | Not Available | Positive | 2534847 - 2536346 | 57358.5 |
| hypothetical protein | DUE52_10285 | Not Available | Positive | 2536422 - 2536859 | 17360.0 |
| t9ss c-terminal target domain-containing protein | DUE52_10290 | Not Available | Negative | 2537023 - 2540862 | 135808.0 |
| dicarboxylate/amino acid:cation symporter | DUE52_10295 | Not Available | Negative | 2541108 - 2542517 | 50558.6 |
| rdd family protein | DUE52_10300 | Not Available | Positive | 2542710 - 2543129 | 15228.0 |
| atp-binding cassette domain-containing protein | DUE52_10305 | Not Available | Positive | 2543377 - 2544291 | 34607.0 |
| abc transporter permease | DUE52_10310 | Not Available | Positive | 2544426 - 2545757 | 49273.4 |
| dna-binding response regulator | DUE52_10315 | Not Available | Negative | 2545870 - 2546643 | 30069.2 |
| hypothetical protein | DUE52_10320 | Not Available | Negative | 2546689 - 2547690 | 37896.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
