Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | DUE52_10225 | Not Available | Negative | 2523683 - 2524429 | 27250.9 |
| m1 family peptidase | DUE52_10230 | Not Available | Negative | 2524797 - 2527352 | 98285.9 |
| abc transporter permease | DUE52_10235 | Not Available | Negative | 2527420 - 2528649 | 45286.8 |
| 30s ribosome-binding factor rbfa | DUE52_10240 | Not Available | Negative | 2528665 - 2529042 | 14561.4 |
| hypothetical protein | DUE52_10245 | Not Available | Positive | 2529243 - 2530670 | 54725.5 |
| ribose 5-phosphate isomerase b | DUE52_10250 | Not Available | Negative | 2530660 - 2531094 | 15777.7 |
| hypothetical protein | DUE52_10255 | Not Available | Positive | 2531142 - 2531408 | 10093.0 |
| tigr00730 family rossman fold protein | DUE52_10260 | Not Available | Positive | 2531444 - 2532241 | 30010.1 |
| helix-hairpin-helix domain-containing protein | DUE52_10265 | Not Available | Negative | 2532331 - 2533332 | 38321.8 |
| j domain-containing protein | DUE52_10270 | Not Available | Positive | 2533527 - 2534408 | 32833.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
