Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_10175 | Not Available | Positive | 2506583 - 2509147 | 95525.5 |
| carbonic anhydrase | DUE52_10180 | Not Available | Negative | 2509262 - 2509945 | 26090.2 |
| sulp family inorganic anion transporter | DUE52_10185 | Not Available | Negative | 2509911 - 2511527 | 57946.7 |
| sam-dependent methyltransferase | DUE52_10190 | Not Available | Positive | 2511686 - 2512930 | 46358.4 |
| hypothetical protein | DUE52_10195 | Not Available | Positive | 2512930 - 2513640 | 26341.8 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DUE52_10200 | Not Available | Negative | 2513846 - 2516344 | 92474.3 |
| magnesium and cobalt transport protein cora | DUE52_10205 | Not Available | Negative | 2516359 - 2517438 | 41684.8 |
| universal stress protein | DUE52_10210 | Not Available | Negative | 2517475 - 2518341 | 32512.7 |
| dna polymerase i | DUE52_10215 | Not Available | Negative | 2518763 - 2521735 | 110931.0 |
| hypothetical protein | DUE52_10220 | Not Available | Negative | 2522145 - 2523185 | 41478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
