Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DUE52_00945 | Not Available | Positive | 249323 - 250102 | 29385.8 |
| laci family transcriptional regulator | DUE52_00950 | Not Available | Negative | 250181 - 250792 | 22348.6 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_00955 | Not Available | Positive | 250640 - 252217 | 57967.1 |
| hypothetical protein | DUE52_00960 | Not Available | Positive | 252419 - 254371 | 73532.9 |
| alpha/beta fold hydrolase | DUE52_00965 | Not Available | Positive | 254504 - 256405 | 71890.5 |
| pseudouridine synthase | DUE52_00970 | Not Available | Negative | 256565 - 258481 | 74196.3 |
| acetoacetate--coa ligase | DUE52_00975 | Not Available | Positive | 258676 - 260733 | 77136.1 |
| s41 family peptidase | DUE52_00980 | Not Available | Positive | 260882 - 262597 | 64029.6 |
| signal recognition particle protein | DUE52_00985 | Not Available | Negative | 262630 - 263949 | 48594.4 |
| hepn domain-containing protein | DUE52_00990 | Not Available | Positive | 264167 - 264583 | 16003.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
