Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | DUE52_00035 | Not Available | Negative | 8775 - 10007 | 46953.5 |
| tonb-dependent receptor | DUE52_00040 | Not Available | Negative | 10009 - 12396 | 89178.8 |
| fadr family transcriptional regulator | DUE52_00045 | Not Available | Negative | 12550 - 13248 | 26275.3 |
| duf1800 domain-containing protein | DUE52_00050 | Not Available | Positive | 13459 - 14895 | 54941.8 |
| duf1501 domain-containing protein | DUE52_00055 | Not Available | Positive | 14909 - 16132 | 45062.6 |
| aldehyde dehydrogenase (nadp(+)) | DUE52_00060 | Not Available | Negative | 16218 - 17744 | 54040.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DUE52_00065 | Not Available | Negative | 17749 - 18603 | 31819.4 |
| dna repair protein reco | DUE52_00070 | Not Available | Positive | 18788 - 19480 | 26428.0 |
| lps export abc transporter atp-binding protein | DUE52_00075 | Not Available | Negative | 19590 - 20321 | 27357.1 |
| single-stranded-dna-specific exonuclease recj | DUE52_00080 | Not Available | Negative | 20370 - 22103 | 65217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
