Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DUE52_09975 | Not Available | Positive | 2465617 - 2466246 | 24241.2 |
| multidrug transporter | DUE52_09980 | Not Available | Positive | 2466325 - 2466771 | 16176.6 |
| duf1059 domain-containing protein | DUE52_09985 | Not Available | Positive | 2466794 - 2466967 | 6286.48 |
| txe/yoeb family addiction module toxin | DUE52_09990 | Not Available | Negative | 2467141 - 2467419 | 10755.0 |
| hypothetical protein | DUE52_09995 | Not Available | Negative | 2467409 - 2467786 | 14182.2 |
| hypothetical protein | DUE52_10000 | Not Available | Negative | 2467802 - 2469124 | 47781.8 |
| hypothetical protein | DUE52_10005 | Not Available | Positive | 2469123 - 2469305 | 6779.45 |
| hypothetical protein | DUE52_10010 | Not Available | Positive | 2469372 - 2470112 | 28657.4 |
| siderophore-interacting protein | DUE52_10015 | Not Available | Positive | 2470215 - 2470910 | 25981.5 |
| helix-turn-helix domain-containing protein | DUE52_10020 | Not Available | Positive | 2470921 - 2471784 | 33332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
