Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DUE52_09875 | Not Available | Positive | 2446128 - 2446880 | 28821.8 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DUE52_09880 | Not Available | Positive | 2447019 - 2448227 | 44976.3 |
| hypothetical protein | DUE52_09885 | Not Available | Positive | 2448306 - 2448614 | 11124.2 |
| ycei family protein | DUE52_09890 | Not Available | Negative | 2448695 - 2449255 | 20465.8 |
| hypothetical protein | DUE52_09895 | Not Available | Negative | 2449257 - 2449979 | 26431.8 |
| hypothetical protein | DUE52_09900 | Not Available | Negative | 2449999 - 2450838 | 30366.4 |
| hypothetical protein | DUE52_09905 | Not Available | Negative | 2450888 - 2451424 | 19944.1 |
| yhs domain-containing protein | DUE52_09910 | Not Available | Negative | 2451455 - 2451955 | 18858.3 |
| response regulator | DUE52_09915 | Not Available | Positive | 2452253 - 2456110 | 143179.0 |
| sigma-54-dependent fis family transcriptional regulator | DUE52_09920 | Not Available | Positive | 2456115 - 2457590 | 55509.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
