Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | DUE52_09825 | Not Available | Positive | 2436260 - 2436952 | 26319.1 |
| glycosyl transferase | DUE52_09830 | Not Available | Positive | 2436949 - 2437932 | 38950.2 |
| hypothetical protein | DUE52_09835 | Not Available | Positive | 2437977 - 2438810 | 32859.3 |
| glycosyltransferase family 2 protein | DUE52_09840 | Not Available | Positive | 2438794 - 2439822 | 39161.9 |
| hypothetical protein | DUE52_09845 | Not Available | Positive | 2439833 - 2440792 | 36273.9 |
| hypothetical protein | DUE52_09850 | Not Available | Positive | 2440998 - 2442299 | 49221.4 |
| glycosyltransferase family 1 protein | DUE52_09855 | Not Available | Positive | 2442317 - 2443477 | 43085.4 |
| glycosyltransferase | DUE52_09860 | Not Available | Positive | 2443495 - 2444673 | 44103.4 |
| glycosyltransferase family 2 protein | DUE52_09865 | Not Available | Positive | 2444670 - 2445593 | 36695.4 |
| colanic acid biosynthesis acetyltransferase wcaf | DUE52_09870 | Not Available | Positive | 2445553 - 2446131 | 21215.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
