Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iia dna topoisomerase subunit b | DUE52_09775 | Not Available | Negative | 2422086 - 2423978 | 71874.7 |
| ligand-binding protein | DUE52_09780 | Not Available | Positive | 2424298 - 2426865 | 93686.6 |
| hypothetical protein | DUE52_09785 | Not Available | Positive | 2426901 - 2427998 | 41338.9 |
| abc transporter permease | DUE52_09790 | Not Available | Positive | 2428079 - 2428918 | 32438.3 |
| abc transporter atp-binding protein | DUE52_09795 | Not Available | Positive | 2429013 - 2430284 | 47803.5 |
| degt/dnrj/eryc1/strs family aminotransferase | DUE52_09800 | Not Available | Positive | 2430277 - 2431350 | 40383.8 |
| hypothetical protein | DUE52_09805 | Not Available | Positive | 2431495 - 2433537 | 77570.6 |
| hypothetical protein | DUE52_09810 | Not Available | Positive | 2433597 - 2434295 | 27388.2 |
| sugar o-acyltransferase | DUE52_09815 | Not Available | Positive | 2434397 - 2435050 | 24411.2 |
| glycosyltransferase | DUE52_09820 | Not Available | Positive | 2435062 - 2436258 | 44126.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
