Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | DUE52_09725 | Not Available | Positive | 2413464 - 2413898 | 15983.1 |
| arac family transcriptional regulator | DUE52_09730 | Not Available | Negative | 2413905 - 2414834 | 35527.7 |
| aldehyde dehydrogenase | DUE52_09735 | Not Available | Positive | 2415059 - 2416597 | 56422.8 |
| duf779 domain-containing protein | DUE52_09740 | Not Available | Positive | 2416695 - 2417078 | 14291.2 |
| abc transporter permease | DUE52_09745 | Not Available | Positive | 2417253 - 2418131 | 32923.0 |
| duf3098 domain-containing protein | DUE52_09750 | Not Available | Positive | 2418192 - 2418395 | 7339.42 |
| undecaprenyl-diphosphate phosphatase | DUE52_09755 | Not Available | Positive | 2418392 - 2419171 | 28564.0 |
| trna pseudouridine(55) synthase trub | DUE52_09760 | Not Available | Positive | 2419176 - 2419874 | 25787.0 |
| bifunctional riboflavin kinase/fad synthetase | DUE52_09765 | Not Available | Positive | 2419871 - 2420803 | 34467.3 |
| prephenate dehydratase | DUE52_09770 | Not Available | Negative | 2420908 - 2421984 | 40340.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
