Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_09675 | Not Available | Positive | 2395590 - 2396033 | 16907.8 |
| hypothetical protein | DUE52_09680 | Not Available | Positive | 2396066 - 2396479 | 15979.3 |
| adenylate/guanylate cyclase domain-containing protein | DUE52_09685 | Not Available | Negative | 2396563 - 2397807 | 46925.0 |
| hypothetical protein | DUE52_09690 | Not Available | Negative | 2397811 - 2398491 | 25697.1 |
| fad-binding protein | DUE52_09695 | Not Available | Negative | 2398488 - 2400224 | 65142.2 |
| hd domain-containing protein | DUE52_09700 | Not Available | Positive | 2400437 - 2401030 | 22745.9 |
| crp/fnr family transcriptional regulator | DUE52_09705 | Not Available | Negative | 2401011 - 2404256 | 122054.0 |
| methylmalonyl-coa mutase | DUE52_09710 | Not Available | Positive | 2404344 - 2407823 | 128972.0 |
| glucosidase | DUE52_09715 | Not Available | Positive | 2408167 - 2410842 | 104048.0 |
| hypothetical protein | DUE52_09720 | Not Available | Positive | 2411145 - 2413301 | 81615.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
