Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | DUE52_09625 | Not Available | Positive | 2385984 - 2387207 | 44093.3 |
| m48 family peptidase | DUE52_09630 | Not Available | Negative | 2387315 - 2388133 | 29968.5 |
| faa hydrolase family protein | DUE52_09635 | Not Available | Positive | 2388283 - 2388894 | 23175.8 |
| m23 family peptidase | DUE52_09640 | Not Available | Positive | 2389047 - 2390909 | 69095.5 |
| thioredoxin-dependent thiol peroxidase | DUE52_09645 | Not Available | Positive | 2390976 - 2391425 | 17048.2 |
| transketolase | DUE52_09650 | Not Available | Positive | 2391499 - 2392356 | 31112.1 |
| chromosome segregation protein smc | DUE52_09655 | Not Available | Positive | 2392359 - 2393378 | 38740.2 |
| hypothetical protein | DUE52_09660 | Not Available | Positive | 2393372 - 2393935 | 20703.8 |
| transketolase family protein | DUE52_09665 | Not Available | Positive | 2393932 - 2394891 | 34491.6 |
| rna polymerase sigma factor | DUE52_09670 | Not Available | Positive | 2394985 - 2395545 | 22161.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
