Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | DUE52_09575 | Not Available | Positive | 2372404 - 2372949 | 20076.0 |
| hypothetical protein | DUE52_09580 | Not Available | Positive | 2373027 - 2373476 | 15877.4 |
| sensor histidine kinase | DUE52_09585 | Not Available | Positive | 2373910 - 2375196 | 48724.8 |
| dehydrogenase | DUE52_09590 | Not Available | Negative | 2375257 - 2379042 | 138663.0 |
| gfo/idh/moca family oxidoreductase | DUE52_09595 | Not Available | Negative | 2379067 - 2380185 | 41720.5 |
| arac family transcriptional regulator | DUE52_09600 | Not Available | Positive | 2380485 - 2381357 | 33257.8 |
| sigma-54-dependent fis family transcriptional regulator | DUE52_09605 | Not Available | Positive | 2381394 - 2382734 | 50020.3 |
| radical sam protein | DUE52_09610 | Not Available | Negative | 2382914 - 2383975 | 40248.6 |
| hypothetical protein | DUE52_09615 | Not Available | Positive | 2384229 - 2384852 | 23515.4 |
| abc transporter atp-binding protein | DUE52_09620 | Not Available | Negative | 2385153 - 2385818 | 24290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
