Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DUE52_00895 | Not Available | Positive | 237160 - 238272 | 41858.1 |
| hypothetical protein | DUE52_00900 | Not Available | Negative | 238406 - 238591 | 7092.62 |
| hypothetical protein | DUE52_00905 | Not Available | Positive | 238707 - 239447 | 28140.8 |
| cu(2+)-exporting atpase | DUE52_00910 | Not Available | Negative | 239686 - 241860 | 78307.4 |
| copper chaperone | DUE52_00915 | Not Available | Negative | 241944 - 242147 | 7304.79 |
| response regulator | DUE52_00920 | Not Available | Negative | 242268 - 242699 | 16906.3 |
| hybrid sensor histidine kinase/response regulator | DUE52_00925 | Not Available | Negative | 242855 - 243967 | 42104.0 |
| chemotaxis protein cheb | DUE52_00930 | Not Available | Negative | 243978 - 244547 | 20020.1 |
| protein-glutamate o-methyltransferase cher | DUE52_00935 | Not Available | Negative | 244714 - 245541 | 31926.4 |
| response regulator | DUE52_00940 | Not Available | Negative | 245538 - 249017 | 130324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
