Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_09475 | Not Available | Positive | 2344379 - 2344765 | 13866.9 |
| hypothetical protein | DUE52_09480 | Not Available | Negative | 2344822 - 2345982 | 43329.8 |
| atp-dependent helicase | DUE52_09485 | Not Available | Positive | 2346116 - 2347354 | 46832.4 |
| nad-dependent epimerase/dehydratase family protein | DUE52_09490 | Not Available | Negative | 2347371 - 2348312 | 34115.9 |
| hypothetical protein | DUE52_09495 | Not Available | Positive | 2348425 - 2349171 | 28582.2 |
| hypothetical protein | DUE52_09500 | Not Available | Negative | 2349182 - 2349379 | 7724.34 |
| s58 family peptidase | DUE52_09505 | Not Available | Negative | 2349471 - 2350703 | 44084.2 |
| t9ss c-terminal target domain-containing protein | DUE52_09510 | Not Available | Negative | 2350882 - 2354475 | 128949.0 |
| peptidase m1 | DUE52_09515 | Not Available | Negative | 2354759 - 2358388 | 139394.0 |
| abc transporter atp-binding protein | DUE52_09520 | Not Available | Negative | 2358486 - 2359388 | 32902.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
