Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DUE52_09425 | Not Available | Negative | 2332265 - 2333101 | 31153.6 |
| cytochrome c | DUE52_09430 | Not Available | Negative | 2333208 - 2333609 | 14839.8 |
| hypothetical protein | DUE52_09435 | Not Available | Negative | 2333643 - 2335322 | 60643.1 |
| hypothetical protein | DUE52_09440 | Not Available | Negative | 2335374 - 2336570 | 44787.4 |
| duf885 domain-containing protein | DUE52_09445 | Not Available | Positive | 2336729 - 2338510 | 67779.2 |
| gntr family transcriptional regulator | DUE52_09450 | Not Available | Positive | 2338535 - 2339365 | 31739.9 |
| hypothetical protein | DUE52_09455 | Not Available | Positive | 2339481 - 2339951 | 17999.6 |
| hypothetical protein | DUE52_09460 | Not Available | Negative | 2340012 - 2340974 | 36326.2 |
| alpha/beta hydrolase | DUE52_09465 | Not Available | Negative | 2341006 - 2341824 | 30017.0 |
| m3 family peptidase | DUE52_09470 | Not Available | Negative | 2342005 - 2344125 | 79782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
