Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class a beta-lactamase-related serine hydrolase | DUE52_09325 | Not Available | Negative | 2308071 - 2309333 | 47180.6 |
| hypothetical protein | DUE52_09330 | Not Available | Positive | 2309380 - 2310639 | 47852.7 |
| hypothetical protein | DUE52_09335 | Not Available | Positive | 2310781 - 2311473 | 27021.1 |
| uma2 family endonuclease | DUE52_09340 | Not Available | Negative | 2311475 - 2312044 | 21903.9 |
| aspartate carbamoyltransferase catalytic subunit | DUE52_09345 | Not Available | Negative | 2312044 - 2312964 | 34037.4 |
| hypothetical protein | DUE52_09350 | Not Available | Positive | 2313117 - 2313596 | 18304.4 |
| uma2 family endonuclease | DUE52_09355 | Not Available | Negative | 2313684 - 2314298 | 23849.6 |
| aminotransferase class v-fold plp-dependent enzyme | DUE52_09360 | Not Available | Negative | 2314363 - 2315670 | 48780.7 |
| hypothetical protein | DUE52_09365 | Not Available | Negative | 2315820 - 2319326 | 129699.0 |
| alpha-amylase | DUE52_09370 | Not Available | Negative | 2319571 - 2321130 | 58988.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
