Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DUE52_09275 | Not Available | Negative | 2295073 - 2296455 | 51614.4 |
| macrolide abc transporter permease | DUE52_09280 | Not Available | Negative | 2296576 - 2297730 | 42982.0 |
| abc transporter permease | DUE52_09285 | Not Available | Negative | 2297820 - 2299064 | 46417.0 |
| abc transporter atp-binding protein | DUE52_09290 | Not Available | Negative | 2299154 - 2299816 | 24531.8 |
| tolc family protein | DUE52_09295 | Not Available | Negative | 2299910 - 2301412 | 56967.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_09300 | Not Available | Negative | 2301402 - 2302661 | 46792.4 |
| hypothetical protein | DUE52_09305 | Not Available | Positive | 2302917 - 2303528 | 22973.0 |
| s9 family peptidase | DUE52_09310 | Not Available | Negative | 2303594 - 2305600 | 75185.0 |
| cysteine hydrolase | DUE52_09315 | Not Available | Negative | 2305930 - 2306571 | 23298.5 |
| hypothetical protein | DUE52_09320 | Not Available | Positive | 2306753 - 2307955 | 43751.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
