Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein | DUE52_09225 | Not Available | Positive | 2283082 - 2283921 | 30811.6 |
| hemin-degrading factor | DUE52_09230 | Not Available | Positive | 2283934 - 2284986 | 38937.6 |
| hypothetical protein | DUE52_09235 | Not Available | Positive | 2285144 - 2285371 | 8582.63 |
| hypothetical protein | DUE52_09240 | Not Available | Positive | 2285423 - 2286022 | 21277.9 |
| hypothetical protein | DUE52_09245 | Not Available | Positive | 2286088 - 2286444 | 13756.5 |
| hypothetical protein | DUE52_09250 | Not Available | Positive | 2286694 - 2287845 | 42777.0 |
| hypothetical protein | DUE52_09255 | Not Available | Negative | 2287943 - 2289337 | 49401.9 |
| tonb-dependent receptor | DUE52_09260 | Not Available | Negative | 2289491 - 2291764 | 83684.6 |
| hypothetical protein | DUE52_09265 | Not Available | Negative | 2292390 - 2293598 | 42810.7 |
| histidine kinase | DUE52_09270 | Not Available | Negative | 2293688 - 2294983 | 48969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
