Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp 3',8-cyclase moaa | DUE52_09075 | Not Available | Positive | 2242464 - 2243444 | 36805.6 |
| abc transporter permease | DUE52_09080 | Not Available | Positive | 2243909 - 2246332 | 89050.7 |
| class a beta-lactamase-related serine hydrolase | DUE52_09085 | Not Available | Negative | 2246400 - 2248082 | 62741.5 |
| arac family transcriptional regulator | DUE52_09090 | Not Available | Negative | 2248178 - 2249008 | 31481.1 |
| type 1 glutamine amidotransferase | DUE52_09095 | Not Available | Negative | 2249132 - 2249701 | 20817.7 |
| serine hydrolase | DUE52_09100 | Not Available | Negative | 2249755 - 2251248 | 56012.1 |
| serine hydrolase | DUE52_09105 | Not Available | Negative | 2251248 - 2252273 | 36976.0 |
| cystathionine gamma-synthase family protein | DUE52_09110 | Not Available | Negative | 2252448 - 2253659 | 43675.2 |
| susc/raga family tonb-linked outer membrane protein | DUE52_09115 | Not Available | Positive | 2253780 - 2256902 | 114314.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_09120 | Not Available | Positive | 2256927 - 2258342 | 51424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
