Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nmra/hscarg family protein | DUE52_09025 | Not Available | Positive | 2231507 - 2232457 | 35183.4 |
| hypothetical protein | DUE52_09030 | Not Available | Negative | 2232492 - 2235242 | 103067.0 |
| mfs transporter | DUE52_09035 | Not Available | Negative | 2235346 - 2236746 | 50176.0 |
| class i sam-dependent methyltransferase | DUE52_09040 | Not Available | Negative | 2236919 - 2237656 | 27330.4 |
| phage holin family protein | DUE52_09045 | Not Available | Positive | 2237743 - 2238165 | 15099.2 |
| organic hydroperoxide resistance protein | DUE52_09050 | Not Available | Negative | 2238422 - 2238841 | 14661.4 |
| hypothetical protein | DUE52_09055 | Not Available | Negative | 2238933 - 2239772 | 30059.1 |
| hypothetical protein | DUE52_09060 | Not Available | Negative | 2239932 - 2240801 | 31993.7 |
| heat repeat domain-containing protein | DUE52_09065 | Not Available | Negative | 2240950 - 2241765 | 30552.1 |
| rna polymerase sigma factor | DUE52_09070 | Not Available | Negative | 2241808 - 2242326 | 20221.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
