Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_00845 | Not Available | Negative | 225069 - 225458 | 14107.5 |
| sensor histidine kinase | DUE52_00850 | Not Available | Negative | 225598 - 226959 | 50553.2 |
| dna-binding response regulator | DUE52_00855 | Not Available | Negative | 226956 - 227651 | 25944.4 |
| response regulator | DUE52_00860 | Not Available | Positive | 227887 - 228312 | 16552.8 |
| peptide-methionine (s)-s-oxide reductase | DUE52_00865 | Not Available | Negative | 228352 - 228945 | 21951.4 |
| polyphosphate kinase 2 family protein | DUE52_00870 | Not Available | Positive | 229251 - 230147 | 35027.7 |
| helix-hairpin-helix domain-containing protein | DUE52_00875 | Not Available | Positive | 230309 - 232357 | 79154.3 |
| duf3800 domain-containing protein | DUE52_00880 | Not Available | Positive | 232493 - 233185 | 26330.2 |
| duf4249 domain-containing protein | DUE52_00885 | Not Available | Negative | 233325 - 234245 | 33555.6 |
| tonb-dependent receptor | DUE52_00890 | Not Available | Negative | 234261 - 236717 | 91901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
