Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 95 protein | DUE52_08970 | Not Available | Negative | 2210997 - 2213840 | 105288.0 |
| na+/glucose cotransporter | DUE52_08975 | Not Available | Negative | 2213859 - 2215436 | 57367.1 |
| gfo/idh/moca family oxidoreductase | DUE52_08985 | Not Available | Negative | 2216224 - 2217285 | 39970.6 |
| l-rhamnose mutarotase | DUE52_08990 | Not Available | Negative | 2217289 - 2219796 | 93316.9 |
| glycoside hydrolase family 2 | DUE52_08995 | Not Available | Negative | 2219922 - 2222702 | 104925.0 |
| arabinosidase | DUE52_09000 | Not Available | Negative | 2222720 - 2223631 | 34998.4 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_09005 | Not Available | Negative | 2223892 - 2225307 | 52722.7 |
| tonb-dependent receptor | DUE52_09010 | Not Available | Negative | 2225331 - 2228504 | 116023.0 |
| duf5060 domain-containing protein | DUE52_09015 | Not Available | Positive | 2228674 - 2230287 | 61803.9 |
| deor/glpr transcriptional regulator | DUE52_09020 | Not Available | Positive | 2230602 - 2231366 | 27743.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
