Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four-carbon acid sugar kinase family protein | DUE52_08920 | Not Available | Positive | 2192732 - 2193943 | 44579.1 |
| sodium transporter | DUE52_08925 | Not Available | Positive | 2193960 - 2195549 | 57930.9 |
| glycoside hydrolase family 127 protein | DUE52_08930 | Not Available | Positive | 2195793 - 2197832 | 75925.0 |
| hypothetical protein | DUE52_08935 | Not Available | Negative | 2197888 - 2200197 | 87298.4 |
| glycoside hydrolase | DUE52_08940 | Not Available | Positive | 2200343 - 2201893 | 59575.4 |
| arac family transcriptional regulator | DUE52_08945 | Not Available | Negative | 2202024 - 2202926 | 34603.9 |
| duf3826 domain-containing protein | DUE52_08950 | Not Available | Positive | 2203389 - 2204069 | 25112.2 |
| tonb-dependent receptor | DUE52_08955 | Not Available | Positive | 2204254 - 2207346 | 113093.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_08960 | Not Available | Positive | 2207358 - 2209133 | 65339.1 |
| glycoside hydrolase family 28 protein | DUE52_08965 | Not Available | Positive | 2209207 - 2210769 | 57429.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
