Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein subunit m | DUE52_08870 | Not Available | Positive | 2177364 - 2178377 | 36674.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_08875 | Not Available | Positive | 2178398 - 2180524 | 75812.6 |
| polysaccharide lyase | DUE52_08880 | Not Available | Positive | 2180794 - 2182437 | 60544.8 |
| pectate lyase | DUE52_08885 | Not Available | Positive | 2182591 - 2185677 | 113520.0 |
| six-hairpin glycosidase | DUE52_08890 | Not Available | Positive | 2185779 - 2187608 | 68609.5 |
| duf3826 domain-containing protein | DUE52_08895 | Not Available | Positive | 2187672 - 2188358 | 25432.5 |
| sialidase | DUE52_08900 | Not Available | Positive | 2188515 - 2189648 | 41373.6 |
| iron-containing alcohol dehydrogenase | DUE52_08905 | Not Available | Positive | 2189662 - 2190810 | 40467.3 |
| dihydrodipicolinate synthase family protein | DUE52_08910 | Not Available | Positive | 2190813 - 2191733 | 33468.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DUE52_08915 | Not Available | Positive | 2191750 - 2192805 | 37748.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
