Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_08815 | Not Available | Negative | 2167605 - 2167838 | 8502.75 |
| duf433 domain-containing protein | DUE52_08820 | Not Available | Positive | 2168142 - 2168381 | 8636.26 |
| hypothetical protein | DUE52_08825 | Not Available | Positive | 2168365 - 2168694 | 12470.3 |
| rna polymerase sigma factor | DUE52_08830 | Not Available | Positive | 2168839 - 2169417 | 22403.8 |
| hypothetical protein | DUE52_08835 | Not Available | Positive | 2169598 - 2170260 | 25935.2 |
| hypothetical protein | DUE52_08840 | Not Available | Positive | 2170337 - 2170657 | 11706.3 |
| tonb-dependent receptor | DUE52_08845 | Not Available | Positive | 2170818 - 2173811 | 110228.0 |
| laci family transcriptional regulator | DUE52_08850 | Not Available | Negative | 2173901 - 2174914 | 37127.9 |
| class 1 fructose-bisphosphatase | DUE52_08855 | Not Available | Positive | 2175211 - 2176212 | 36452.7 |
| ferredoxin | DUE52_08865 | Not Available | Positive | 2176544 - 2177344 | 28598.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
