Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DUE52_08765 | Not Available | Negative | 2151325 - 2152248 | 34102.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_08770 | Not Available | Negative | 2152261 - 2153190 | 33642.7 |
| tolc family protein | DUE52_08775 | Not Available | Negative | 2153211 - 2154476 | 46837.1 |
| tetr/acrr family transcriptional regulator | DUE52_08780 | Not Available | Negative | 2154546 - 2155163 | 23437.9 |
| hybrid sensor histidine kinase/response regulator | DUE52_08785 | Not Available | Positive | 2155421 - 2159482 | 152427.0 |
| glycoside hydrolase family 88 protein | DUE52_08790 | Not Available | Negative | 2159679 - 2161580 | 72156.1 |
| cation-transporting p-type atpase | DUE52_08795 | Not Available | Positive | 2161800 - 2164463 | 96761.9 |
| l-rhamnose mutarotase | DUE52_08800 | Not Available | Positive | 2164537 - 2164851 | 12064.4 |
| glycosylase | DUE52_08805 | Not Available | Positive | 2165135 - 2166214 | 40671.4 |
| hypothetical protein | DUE52_08810 | Not Available | Positive | 2166375 - 2167514 | 43104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
