Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_08710 | Not Available | Negative | 2136537 - 2136959 | 15642.6 |
| acyltransferase | DUE52_08715 | Not Available | Negative | 2137059 - 2138222 | 43492.1 |
| lysr family transcriptional regulator | DUE52_08720 | Not Available | Negative | 2138443 - 2139336 | 33386.5 |
| fad-dependent oxidoreductase | DUE52_08725 | Not Available | Positive | 2139529 - 2141169 | 61413.6 |
| glycoside hydrolase family 2 protein | DUE52_08730 | Not Available | Negative | 2141237 - 2144056 | 104688.0 |
| beta-xylosidase | DUE52_08735 | Not Available | Negative | 2144182 - 2145759 | 59205.9 |
| mfs transporter | DUE52_08745 | Not Available | Negative | 2146723 - 2148054 | 48913.9 |
| abc transporter permease | DUE52_08750 | Not Available | Negative | 2148231 - 2149346 | 41590.9 |
| abc transporter permease | DUE52_08755 | Not Available | Negative | 2149343 - 2150449 | 40930.5 |
| abc transporter atp-binding protein | DUE52_08760 | Not Available | Negative | 2150585 - 2151319 | 26951.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
