Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | DUE52_08660 | Not Available | Negative | 2124034 - 2125392 | 49879.5 |
| chromosomal replication initiator protein dnaa | DUE52_08665 | Not Available | Positive | 2125808 - 2127217 | 53286.7 |
| gnat family n-acetyltransferase | DUE52_08670 | Not Available | Positive | 2127303 - 2128262 | 36472.8 |
| gnat family n-acetyltransferase | DUE52_08675 | Not Available | Positive | 2128232 - 2129269 | 40118.5 |
| duf3108 domain-containing protein | DUE52_08680 | Not Available | Negative | 2129290 - 2130093 | 30888.0 |
| aminopeptidase | DUE52_08685 | Not Available | Negative | 2130196 - 2131239 | 40563.4 |
| hypothetical protein | DUE52_08690 | Not Available | Negative | 2131269 - 2132288 | 38986.9 |
| recombinase reca | DUE52_08695 | Not Available | Positive | 2132535 - 2133605 | 38071.0 |
| citrate synthase | DUE52_08700 | Not Available | Negative | 2133793 - 2135079 | 47914.2 |
| duf3500 domain-containing protein | DUE52_08705 | Not Available | Positive | 2135426 - 2136493 | 40223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
